open-cravat

Getting started

  • Intro to OpenCRAVAT
  • Getting Started with the Website and GUI
  • Getting Started with Open-Cravat on the Command Line
  • Installation Instructions
  • Command line usage
  • Viewing Results
  • GUI usage
  • OpenCRAVAT reports
  • Uninstallation
  • Update instructions

Additional Tools

  • Single Variant Report
  • Large VCF Annotation
  • Usage
  • Output Format

Advanced

  • Filter tutorial
  • Filter tab Layout
  • Sample Filters
  • File formatting for samples
  • Gene Filters
  • Variant Properties Filters
  • Saving filter files
  • Loading filter files
  • Case-Control Analysis
  • Cloud Usage
  • HPC Cluster Usage
  • AWS OpenDATA
  • API
  • Multiuser support
  • Filter and Merge Result Databases
  • Package
  • Release notes
  • Metrics

For contributors

  • Devloper onboarding
  • File Formats
  • Annotator reference
  • Annotator tutorial
  • Widget tutorial
  • Reporter tutorial
  • Publish
open-cravat
  • Search

© Copyright 2025, Kyle Moad, Kyle Anderson, Jasmine Baker, Rachel Karchin.

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